The invention relates to medical equipment, in particular to medical apparatus disinfecting equipment. The medical apparatus disinfecting equipment comprises an ultraviolet disinfection mechanism, a disinfection and filling mechanism and a disinfection tank mechanism. The medical apparatus disinfecting equipment disclosed by the invention has the functions of ultraviolet circulating disinfection,swinging soaking, automatic feeding and multi-position adjusting, and the equipment is convenient to adjust according to the situation; and the ultraviolet disinfection mechanism is connected with thedisinfection and filling mechanism, the disinfection and filling mechanism is connected with the disinfection tank mechanism, and the disinfection tank mechanism is connected with the ultraviolet disinfection mechanism.