A system for sanitizing footwear through the use of pulsed ultraviolet (UV) light. The system can include an area that receives footwear of a user and applies a PUV light to the footwear to eliminate pathogens residing on the footwear. The system may contain a protective housing to ensure that exposure to the PUV light is limited to the footwear received in the PUV light area. The system contains electrical circuitry or control mechanism for operation of the PUV light. The system may also contain a brush area so that a user may remove dirt or solid particles from the footwear by engaging bristles that contact the underside and sides of the footwear. The intensity and the duration of the PUV light may be predetermined depending on the requirements of the facility intending to use the system.