A method for managing a secure element (SE) is disclosed. The method for managing the SE includes identifying secure information stored in the SE, sending a command to request to set suspension of use of a means of payment included in the secure information stored in the SE to a secure server, generating backup data using at least part of the identified secure information, transmitting the backup data from the SE to the secure server through a secure channel set between the secure server and the SE and storing the backup data, transmitting a restoration command on the secure information to the secure server, and restoring the backup data of the secure server to the SE or another SE.