Invention Grant
- Patent Title: Methods and compositions for detection of small RNAs
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Application No.: US15287254Application Date: 2016-10-06
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Publication No.: US10041107B2Publication Date: 2018-08-07
- Inventor: Sergei A. Kazakov , Pavan Kumar , Brian H. Johnston
- Applicant: SomaGenics, Inc.
- Applicant Address: US CA Santa Cruz
- Assignee: SOMAGENICS, INC.
- Current Assignee: SOMAGENICS, INC.
- Current Assignee Address: US CA Santa Cruz
- Agency: Wilson Sonsini Goodrich & Rosati
- Main IPC: C12Q1/68
- IPC: C12Q1/68 ; C12Q1/682 ; C12Q1/6806 ; C12Q1/6865

Abstract:
Currently, the circularization of small RNAs is broadly regarded as an obstacle in ligation-related assays and explicitly avoided while short lengths of linear RNA targets is broadly recognized as a factor limiting use of conventional primers in PCR-related assays. In contrast, the disclosed invention capitalizes on circularization of small RNA targets or their conjugates with oligonucleotide adapters. The circular RNA templates provide amplification of the target sequences via synthesis of multimer nucleic acids that can be either labeled for direct detection or subjected to PCR amplification and detection. Structure of small circular RNAs and corresponding multimeric nucleic acids provide certain advantages over current methods including flexibility in design of conventional RT and PCR primers as well as use of 5′-overlapping dimer-primers for efficient and sequence-specific amplification of short target sequences. Our invention also reduces number of steps and reagents while increasing sensitivity and accuracy of detection of small RNAs with both 2′OH and 2′-OMe at their 3′ ends. Our invention increase sensitivity and specificity of detection of microRNAs and other small RNAs with both 2′OH and 2′-OMe at their 3′ ends while allowing us to distinguish these two forms from each other.
Public/Granted literature
- US20170159106A1 METHODS AND COMPOSITIONS FOR DETECTION OF SMALL RNAS Public/Granted day:2017-06-08
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