A vehicle control system to reduce shocks under an autonomous mode is provided. The vehicle control system is configured to select an operating mode of a vehicle from a manual mode in which a driving force and a braking force are controlled manually by a driver, and an autonomous mode in which the driving force and the braking force are controlled autonomously. A controller is configured to execute a fuel cut-off control, and a threshold selected under the autonomous mode is set in such a manner as to terminate the fuel cut-off control earlier than under the manual mode.