The present invention relates to the supercritical CO2 generation system applying plural heat sources. The supercritical CO2 generation system applying plural heat sources includes a pump circulating a working fluid; a plurality of heat exchangers heating the working fluid using an external heat source and including a plurality of constrained heat sources having an emission regulation condition of an outlet end thereof and a plurality of general heat sources without the emission regulation condition; a plurality of turbines operated by the working fluid heated by passing through the heat exchangers; and a plurality of recuperators cooling the working fluid passing through the turbines by heat exchange between the working fluid passing through the turbines and the working fluid passing through the pump, wherein the working fluid passing through the turbine is branched into the recuperators, respectively.