An imaging apparatus has a focus adjustment mechanism based on auto focus adjustment of an imaging plane phase difference scheme. An imaging element has a plurality of micro-lenses and a plurality of photoelectric conversion units corresponding to the micro-lenses and acquires a pupil-divided image signal. An auto focus (AF) signal processing unit and a camera control unit perform shading correction on a image for each pupil division acquired from the imaging element. The recording medium control unit controls an operation of recording a correction value to be used in shading correction in a recording medium when the image signal before correction for each pupil division is recorded in the recording medium.