A method for making an orthodontic bracket comprising: receiving, by a processor of a computer system, a three-dimensional digital model of an orthodontic bracket; determining, by the processor, a compensation factor to be applied when manufacturing the orthodontic bracket using the laser-based system, the determining the compensation factor including: aligning the three-dimensional digital model of the orthodontic bracket in a three-dimensional space with a predetermined position; determining a deviation of a position of a model groove base from a desired position of the model groove base, the compensation factor being based on the deviation and relating to an amount of material to be used during the manufacturing of the orthodontic bracket; causing the laser-based system to apply the compensation factor for manufacturing the orthodontic bracket.