An engine system includes a compression ignition diesel engine connected with an aftertreatment system. A source of diesel fuel, which may have a high sulfur content, is fluidly connected to the engine. The aftertreatment system includes a particle trap fluidly positioned between the engine and the tailpipe, and an SCR catalyst fluidly positioned on the particle trap or between the particle trap and the engine. The SCR catalyst is a sulfur tolerant SCR catalyst. A non-thermal particle trap regeneration system includes a valve fluidly positioned between a particulate volume and an inlet to the particle trap. A reductant system has a doser positioned, possibly in the exhaust manifold, to deliver a reductant into the aftertreatment system upstream from the SCR catalyst.