A method of manufacturing nuclear fuel elements may include: forming a base portion of the fuel element by depositing a powdered matrix material including a mixture of a graphite material and a fibrous material; depositing particles on the base portion in a predetermined pattern to form a first particle layer, by controlling the position of each particle in the first particle layer; depositing the matrix material on the first particle layer to form a first matrix layer; depositing particles on the first matrix layer in a predetermined pattern to form a second particle layer by controlling positions of each particle in the second particle layer; depositing the matrix material on the second particle layer to form a second matrix layer; and forming a cap portion of the fuel pebble by depositing the matrix material. The particles in the first particle layer and the second particle layer include nuclear fuel particles.