The present invention belongs to the technical field of high throughput preparation and hot working of materials, and in particular to a high throughput micro-synthesis method of multi-component materials based on the temperature gradient field controlled by microwave energy. This invention, characterized by flexible material selection, quick temperature rising and high-efficient heating, uses microwave heating both to achieve quick preparation of small block combinatorial materials under the same temperature field in one time and to realize micro-synthesis under the different temperature gradient fields in one time including high-throughput sintering-melting and heat treatment of materials. This invention successfully overcomes drawbacks of current material preparation, such as unitary combination of components, low-efficient external heating, unique control temperature, huge material consumption and high cost during material preparation and heat treatment.