Beamforming channels of a satellite are calibrated using a low power, spread spectrum calibration signal. The power of the calibration signal is below the noise level of a user signal in an active channel, allowing channels to be calibrated while active. When calibrating the transmit side circuitry, a two-stage calibration can be used, first calibrating the output hybrid matrix, then calibrating the whole of the transmit side. To improve performance, the dwell time spend calibrating a channel can be based on the power of the user signal in the channel. A transmit probe can be used to inject a calibration signal into the receive antennae and a receive probe can be used to extract the calibration signal from the transmit antennae. To reduce frequency of calibrations, the calibrations can be based on path-to-path differences. These techniques are also applied to multiport amplifiers (MPAs).