Methods and systems for reconstructing surfaces of an object using regional level sets (RLS) are disclosed. A scanning system scans an object and generates a point cloud. An RLS is iteratively determined as solution to a differential equation constrained by the point cloud. The RLS is a 2-tuple, where the first component corresponds to a region identification and the second component corresponds to the solution of the differential equation. The space around the point cloud is iteratively segmented into a plurality of regions. A single solution to the differential equation is applied, encompassing all the regions. The solution in regions of the space corresponding to the finer structures within the point cloud are modeled similar to the coarser regions. The solution in a particular region is iteratively based on the solution in the neighboring regions. An RLS is enabled to reconstruct thinner or smaller structures or surfaces of the object.