Various methods and assemblies are provided for producing composite components having formed in features. For example, a method may comprise depositing a composite material on a base tool; aligning an aperture forming tool with a tooling aperture in the base tool; inserting the aperture forming tool through the composite material to form an aperture in the composite material; deploying a feature forming tool to press the composite material into one or more recesses; and processing the composite material with the feature forming tool in contact with the composite material. In some embodiments, the feature forming tool includes a stem extending through the composite material and into the base tool, as well as a feature forming head that is brought into contact with and processed with the composite material. In other embodiments, a tooling assembly holds a pin in place during processing to fix the pin in the composite component.