A method includes interpreting NOx data indicative of an amount of NOx exiting an engine and an amount of NOx exiting an exhaust aftertreatment system coupled to the engine, determining a NOx conversion efficiency fault is present based on the amount of NOx exiting the engine and the amount of NOx exiting the exhaust aftertreatment system, and determining at least one of a selective catalytic reduction (SCR) catalyst of the exhaust aftertreatment system and a diesel particulate filter having a coating of a SCR reaction catalyst (DPF-SCR) of the exhaust aftertreatment system are responsible for the NOx conversion efficiency fault based on at least one of a reductant slip amount and a NOx conversion value across at least one of the SCR catalyst and the DPF-SCR.