A bicycle control apparatus is basically provided with a controller. The controller includes a processor, a memory, and an I/O interface. The controller is arranged to communicate with an assist mechanism of a bicycle. The assist mechanism includes an assist motor arranged to impart a supplemental drive force to the bicycle to supplement a manual drive force of the bicycle. The controller is programmed to alternately set a first control state or a second control state. The controller controls the assist motor such that an output state of the assist motor with respect to a manual drive force of the bicycle is different in the first control state than in the second control state.