Apparatus, systems, articles of manufacture, and methods are disclosed for multiple scrambled layers for audio watermarking. An example system includes a scrambler executing instructions to: divide a watermark into a plurality of watermark symbols; map the watermark symbols to a plurality of frequency bins in a plurality of frequency clumps according to a first distribution scheme to create a first watermark layer having a first combination of the frequency bins and a second watermark layer having a second combination of the frequency bins, the first combination of the frequency bins and the second combination of the frequency bins partially overlap. The scrambler also is to determine a sequence for shifting watermark symbols among the frequency bins, and generate a second distribution scheme to map the watermark symbols in accordance with the sequence. The example system also includes a transceiver to communicate the second distribution scheme to a device.