A continuously variable valve duration (CVVD) system includes an electronic control unit (ECU) configured to output a command for adjusting an actuator and a controller configured to determine a operation range of a control shaft of the actuator and adjust the control shaft in the determined operation range based on the command of the ECU. The controller positions the control shaft at a predetermined target phase and determines a control state of each target phase based on a target phase value transmitted from the actuator when the control shaft is positioned at the target phase.