Invention Grant
- Patent Title: Information processing apparatus and method of collecting genome data
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Application No.: US15700802Application Date: 2017-09-11
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Publication No.: US10861585B2Publication Date: 2020-12-08
- Inventor: Yoshifumi Ujibashi , Minoru Nakamura
- Applicant: FUJITSU LIMITED
- Applicant Address: JP Kawasaki
- Assignee: FUJITSU LIMITED
- Current Assignee: FUJITSU LIMITED
- Current Assignee Address: JP Kawasaki
- Agency: Staas & Halsey LLP
- Priority: JP2016-181677 20160916
- Main IPC: G01N33/48
- IPC: G01N33/48 ; G06F15/00 ; G16B20/00 ; G16B30/00

Abstract:
An information processing apparatus includes a memory and a processor coupled to the memory and configured to extract data having x times y bits from genome data in which a mutation pattern at each gene mutation position is represented as x bits, such that the extracted data is constituted by y data pieces each having x bits at y respective mutation positions, x and y being integers greater than or equal to 1, respectively, to refer to an addend table that stores a plurality of addend data associated with respective x-times-y-bit data to identify addend data corresponding to the extracted data, and to use an SIMD instruction to add the identified addend data to count data at positions corresponding to the y mutation positions in the genome data, the count data indicating counts of occurrences of mutation patterns in the genome data.
Public/Granted literature
- US20180082013A1 INFORMATION PROCESSING APPARATUS AND METHOD OF COLLECTING GENOME DATA Public/Granted day:2018-03-22
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