A control device of an engine including a cylinder, a piston, a cylinder head, and a combustion chamber is provided, which includes intake and exhaust ports, a swirl control valve provided in an intake passage connected to the intake port, a fuel injection valve attached to the cylinder head to be oriented into the center of the combustion chamber in a plan view thereof, and having first and second nozzle ports, and a control unit. The control unit includes a processor configured to execute a swirl opening controlling module to output the control signal to the swirl control valve to have a given opening at which a swirl ratio inside the combustion chamber becomes 2 or above, and a fuel injection timing controlling module to output the control signal to the fuel injector to inject fuel at a given timing at which the swirl ratio becomes 2 or above.