One variation of a method for deploying sensors within an agricultural facility includes: accessing scan data of a set of modules deployed within the agricultural facility; extracting characteristics of plants occupying the set of modules from the scan data; selecting a first subset of target modules from the set of modules, each target module in the set of target modules containing a group of plants exhibiting characteristics representative of plants occupying modules neighboring the target module; for each target module, scheduling a robotic manipulator within the agricultural facility to remove a particular plant from a particular plant slot in the target module and load the particular plant slot with a sensor pod from a population of sensor pods deployed in the agricultural facility; and monitoring environmental conditions at target modules in the first subset of target modules based on sensor data recorded by the first population of sensor pods.