A local shimming system for magnetic resonance imaging and the method thereof, wherein the shimming method comprises the following steps: collecting B0 field map information using two-dimensional gradient echo (301); calculating and evaluating the homogeneity of B0 (302); optimizing the current of each channel shim coil (303); determining whether the minimum standard deviation value of Δf is obtained (304); outputting an optimal current combination values and setting an optimum current value corresponding to each channel of the shim coil on the current control software (305); and testing and evaluating the homogeneity of B0 to achieve the shimming goal (306).