The present invention discloses a rabbit coccidiosis vaccine and application thereof, the vaccine comprises 100 to 800 Eimeria media/dose, 200 to 1600 Eimeria magna/dose, and 100 to 800 Eimeria intestinalis/dose. The composition of the vaccine possesses the characteristics as scientific reasonable, low cost, no drug residue or drug resistance or environmental pollution would occur, good immunogenicity and safe to use. After oral immunization in rabbits, it may effectively resist the infections of 1×105 Eimeria media, 5×104 Eimeria magna and 3×103 Eimeria intestinalis. It also may be used to prepare a pharmaceutical preparation against rabbit coccidiosis.