A focus detection apparatus comprises a determination unit that determines whether a first signal output from an image sensor satisfies a predetermined condition, and outputs first information indicating a result of the determination, a calculation unit that performs filter processing on a plurality of the first signals using predetermined coefficients at a predetermined cycle and outputs a second signal, a generation unit that generates second information showing an effect of the first signal which satisfies the predetermined condition on the second signal using the coefficients and plural pieces of the first information corresponding to the plurality of the first signals used in the filter processing, and a focus detection unit that detects a focus state based on a plurality of the second signals and the second information.