A storage system and method for multiprotocol handling are provided. In one embodiment, a computing device is provided comprising a plurality of communication channels configured to communicate with a storage system, wherein a first communication channel has a faster data transfer speed than a second communication channel. The computing device also comprises a processor configured to determine a priority level of a command; send the command with an indication of its priority level to the storage system; in response to the command being a high-priority command, use the first communication channel for transferring data for the command; and in response to the command being a low-priority command, use the second communication channel for transferring data for the command. Other embodiments are provided.