A control system for a hybrid vehicle includes: an electric heater configured to heat a catalyst of an internal combustion engine; a position determination unit configured to determine whether the hybrid vehicle is located in an exit area of a low emission zone where operation of the internal combustion engine is supposed to be restricted, the exit area being an area adjacent to a boundary of the low emission zone; and a heater control unit configured to turn on the electric heater when the position determination unit determines that the hybrid vehicle is located in the exit area.