A system and method is disclosed for the start-up and control of pulsejet engines and this system includes an Electronic Fuel Injection (“EFI”) system that further includes one or more electrically controlled fuel injectors that can be selectively operated for start-up and control of such pulsejet engines. According to the system and method, the rate and/or pattern of fuel delivery to pulsejet engines can be varied not only by controlling the amount of time the fuel injectors are open versus closed to define a “duty cycle,” but also with the capability to selectively disable one or more fuel injectors in the programmed manner for start-up and control of such pulsejet engines.