A waste system is disclosed. In some embodiments, the waste system includes a vacuum cell, a flexible waste container, and a vacuum source. The flexible waste container may have at least one flexible membrane at an interface between the flexible waste container and the vacuum cell. The vacuum source may be configured to suction air out of the vacuum cell to generate a negative pressure in the vacuum cell. The vacuum source discharge is generally odorless as it is separated from the waste. This odorless discharge can enter occupied aircraft compartments. The negative pressure in the vacuum cell acts on the flexible waste container to generate a (second) negative pressure in the flexible waste container. The negative pressure in the flexible waste container acts on an interface between a toilet and the flexible waste container to pull waste from the toilet into the flexible waste container.