In a method and system for acquiring measurement data reference data for a phase correction of the measurement data, a RF excitation pulse is provided to excite spins in the object under examination, one or more RF refocusing pulses are provided to refocus the spins excited by the RF excitation pulse, measurement data is acquired by recording echo signals of refocused spins excited by the RF excitation pulse by switching readout gradients that alternate in their polarity, at least two echo signals are recorded while switching readout gradients with different polarity acquire reference data, chronologically between the providing of the RF excitation pulse and the acquisition of the measurement data, and correction data is determined for phase correction of phase errors contained in the measurement data based on the acquired reference data.