An imaging unit of an MRI apparatus performs imaging of a positioning image of a subject including a spine; a first imaging that images a cross section including the spine and extending along a longitudinal direction of the spine; and a second imaging that images a cross section in a direction of traversing the spine. An automatic cross-section position setting unit detects a specific tissue of the spine using a scout image or an image including the spine acquired in the first imaging step, performs a matching process between the detected specific tissue of the spine and a spine model, and calculates an imaging cross-section position of the second imaging based upon a specific tissue position of the spine specified by matching, thereby performing automatic setting.