A linear motor conveyor system having a moving element including a first and a second magnetic element on opposite sides; a first track including a first linear motor configured to generate a dynamic magnetic field which acts on the first magnetic element to provide a first lateral force and a first longitudinal force; a second track with a transfer region positioned adjacent to the first track, the second track configured to generate a magnetic field that acts on the second magnetic element to provide a second lateral force; and a controller to control the first linear motor such that the first dynamic lateral force is configured to bias the moving element toward the first linear motor until the moving element reaches a switch point in the transfer region, where the first and second lateral forces are selectively adjusted to bias the moving element toward the second track.