An apparatus for incremental motion correction in medical imaging. The apparatus for motion correction in magnetic resonance imaging includes processing circuitry configured to estimate an intermediate image from a first section of k-space, the first section of the k-space corresponding to acquisition time points within a magnetic resonance scan of a subject, the corresponding acquisition time points within the magnetic resonance scan being associated with shots of the k-space determined to have minimal motion, estimate motion parameters of a second section of the k-space using the estimated intermediate image, combine data from the first section of the k-space with data from the second section of the k-space according to the estimated motion parameters, and reconstruct the combined data of the k-space to generate a final image.