- Patent Title: Unbiased identification of tumor rejection mediating neoepitopes
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Application No.: US17225374Application Date: 2021-04-08
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Publication No.: US11920202B2Publication Date: 2024-03-05
- Inventor: Pramod K. Srivastava , Ion I Mandoiu , Cory A Brennick , Mariam M George , Marmar Moussa
- Applicant: University of Connecticut
- Applicant Address: US CT Farmington
- Assignee: UNIVERSITY OF CONNECTICUT
- Current Assignee: UNIVERSITY OF CONNECTICUT
- Current Assignee Address: US CT Farmington
- Agency: CANTOR COLBURN LLP
- Agent Nicholas R. Herrel, Esq.
- Main IPC: C12Q1/6886
- IPC: C12Q1/6886 ; G01N33/78 ; G16B15/30 ; G16B20/00 ; G16B35/20 ; G16B45/00

Abstract:
Described herein is an unbiased method of identifying tumor rejection mediating neoepitopes (TRMNs). Putative neoepitopes from a cancer cell exome sequence from a cancer patient are putative neoepitopes are unbiased by MHC binding and/or CD8T* reactivity. By plotting the putative neoepitope IC50s on one axis, and the non-mutated amino acid sequence IC50s on a perpendicular axis to provide a bivariate scatter plot, novel TRMNs are identified TRMNs the neoepitopes in the bivariate scatter plot which are in the space greater than 501 nM on the x-axis and greater than 501 nM on the y-axis. Peptides and nucleic acids for expressing peptides including the TRMNs are also described.
Public/Granted literature
- US20210317533A1 UNBIASED IDENTIFICATION OF TUMOR REJECTION MEDIATING NEOEPITOPES Public/Granted day:2021-10-14
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