Keypoint extraction is done for extracting keypoints from images of documents. Based on different keypoint extraction approaches used by existing keypoint extraction mechanisms, number of keypoints extracted and related parameters vary. Disclosed herein is a method and system for keypoint extraction from images of one or more documents. In this method, a reference image and a test image of a document are collected as input. During the keypoint extraction, based on types of characters present in words extracted from the document images, a plurality of words are extracted. Further, all connected components in each of the extracted words are identified. Further, it is decided whether keypoints are to be searched in a first component or in a last component of all the identified connected components, and accordingly searches and extracts at least four of the keypoints from the test image and the corresponding four keypoints from the reference image.