Aspects of a method and system for a variable spreading factor Walsh Hadamard Transform engine are presented. Aspects of the system may include a variable spreading factor Fast Walsh Hadamard Transform engine that enables spread spectrum encoding of data from each of a plurality of data sources. A plurality of spreading factors may be utilized wherein at least 2 of the plurality of spreading factors differ. The variable spreading factor Fast Walsh Hadamard Transform engine may enable combination of a plurality of spread spectrum encoded data to form a data vector.