Various methods are provided for an integrated micro array system (100) that allows fully automated sample processing and detection/quantification of nucleic acid and protein samples in a single analytical device, which may be configured to communicate data to a person other than the person operating the device. The integrated micro array system has a housing (110) in which robotics assembly (120) controls motion of automatic pipette (124) and second actuator (122) that control motion of the automatic actuator (123). Fluidics station (130) includes a plurality of multi-reagent packs (132). Sample station (140) comprises a plurality of sample vessels (142). Pipette tip storage area (150) and magazine holder (160) that includes a plurality of magazine (162). The system also comprise of a sample processing platform (170), a stringency station (181), and optical detector (180), and a data transfer device (190).