The present invention relates to the deviation-correction system for positioning of moving objects, and discloses a deviation-correction system for positioning of moving objects and the motion-tracking method thereof. The system includes a control system for receiving motion parameters required for deviation-correction, and sending commands to an actuator to control a moving object based on the motion parameters, the deviation-correction system for positioning of moving objects further comprising: a reference object which is set as a specified motion trail for the moving object; an image capturing system for acquiring successive digital image data upon the moving object moves; a motion tracking system for performing a motion tracking algorithm based on the digital image data transmitted by the image capturing system to judge whether the current motion state needs to be corrected and then transmitting the motion parameters required for deviation-correction to the control system.