A method is used to configure an extended analog computer for use as an application controller. The method includes selecting input pins from among a plurality of pins in a continuous sheet processor, selecting an arrangement of intermediate and output pins from among the remaining pins in the plurality of pins in the continuous sheet processor, applying a pattern data set to the input pins, using an evolutionary algorithm, coupling current sources and sinks to the intermediate and output pins, measuring an error between an output and its expected value, and continuing to select intermediate and output pin arrangements, apply pattern data sets, and measure errors until a configuration threshold is met.