A system for automatically uploading a constellation module for a motion tracking system is provided comprising a programmable computer system having a first electronically readable storage medium. A motion tracking system is in communication with the programmable computer system, and includes a controller having a second electronically readable storage medium and a plurality of transponders. A configuration module resides on the first electronically readable medium. The configuration module is adapted to communicate with the motion tracking system and includes a first configuration parameter adapted to automatically instruct the second electronically readable storage medium to delete an existing constellation module, a second configuration parameter adapted to automatically acquire a desired replacement constellation module, and a third configuration parameter adapted to automatically transfer the replacement constellation module to the second electronically readable storage medium. A method for using the system is also provided.