The present disclosure relates to in-situ, line-of-sight measurements of partial pressure and temperature associated with at least one flow channel of a fuel cell. Tunable diode laser absorption spectroscopy (TDLAS) is employed for measurements for which water transition states sensitive to temperature and partial pressure are utilized. Measurements are achievable for a fuel cell operating under both steady-state and time-varying load conditions. For steady-state operation, the water partial pressure increases with increasing current density on a cathode side of the fuel cell due to production of water by electrochemical reaction. Temperature in a gas phase remains relatively constant since the fuel cell housing temperature is controlled externally. For non-steady-state operation of the fuel cell through a time-varying current profile, the water partial pressure responds to the load changes rapidly and follows a current profile. The gas temperature varies in response to the dynamic loading and departures from steady-state conditions become more apparent at higher fuel cell operating temperatures.