The invention is a hydrogen passivation shut down system for a fuel cell power plant (10, 200). During shut down of the plant (10, 200), hydrogen fuel is permitted to transfer between an anode flow path (24, 24′) and a cathode flow path (38, 38′). A passive hydrogen bleed line (202) permits passage of a smallest amount of hydrogen into the fuel cell (12′) necessary to maintain the fuel cell (12′) in a passive state. A diffusion media (204) may be secured in fluid communication with the bleed line (202) to maintain a constant, slow rate of diffusion of the hydrogen into the fuel cell (12′) despite varying pressure differentials between the shutdown fuel cell (12′) and ambient atmosphere adjacent the cell (12′).