A system includes a portable source of gaseous chlorine dioxide (CD). The source has first source and return couplings for sealingly connecting to a CD generation flow path comprising at least one gas conduit. The CD generation flow path comprises second source and return couplings for sealingly connecting the source to a device to be treated with the CD generation flow path, or a tent structure enclosing the device to be treated. A portable scrubber has third couplings for sealingly connecting to a scrubbing flow path comprising at least one gas conduit for removing the CD from the device or tent structure. The gas conduit has fourth couplings for connecting the device or tent structure to the scrubbing flow path.