A method and system for cyber security management of Supervisory Control And Data Acquisition (SCADA) systems is provided to enhance situational awareness and cyber security management for industrial control systems. A centralized System Security Manager (SSM) is integrated into a SCADA to collect security related data for the industrial control system and an integrated command and control user interface displays security related data, a system security level, and interfaces with a user to allows for changing of system security settings for the industrial control system based on the security related data collected and manages changes in operational state of the SCADA based on the security level to restrict use of system interfaces and system accesses.