A computer system employs a network that between a data programming system and one or more superconducting programmable devices of a superconducting processor chip. Routers on the network, such as first-, second- and third-stage routers direct communications with the superconducting programmable devices. A superconducting memory register may load data signals received from a first-stage router into corresponding superconducting programmable devices. The system may employ additional superconducting chips, first-, second- or third-stage routers.