A method, a system and computer program product for resolving conflicts in applications are disclosed, A first set of instructions configured to use a second set of instructions is identified during execution of a program having the first set of instructions. A third set of instructions couples the first set of instructions to the second set of instructions. I Incompatibility between the first set of instructions and the second set of instructions is identified, in response to compiling the first set of instructions and compiling the second set of instructions. A mechanism is provided for the third set of instructions to modify the second set of instructions, which result in a modified second set of instructions compatible with the first set of instructions.