A security control system for personal communication terminals includes: a terminal registration agent for registering information on a personal communication terminal of a worker or visitor present within a security area into a terminal security control server and a zone notification node for providing the information of the personal communication terminal that has entered a control zone covered by the zone notification node in the security area when the personal communication terminal moves to the control zone. The system further includes the terminal security control server for installing a security control software module in the personal communication terminal, configuring computing resources and components permitted within the control zone based on a security control policy and zone information, and providing the configured computing resources and components to the personal communication terminal.