Disclosed herein are methods and systems for scanning objects and associated substances, where the methods include: (a) using a first electronic device to scan a feature of an object and provide reference information about the object based on the scanned feature, where the feature identifies the object or a substance associated with the object; (b) using a second electronic device to measure electromagnetic radiation emitted from the object and provide sample information about the object based on the measured electromagnetic radiation; and (c) comparing the sample information and the reference information to determine whether the object includes the substance associated with the object.