An animal handling system for use in a magnetic resonance device (MRD) device, including: a first elongated enclosure having a proximal end, a distal open end and a first geometry, and a second elongated enclosure having a proximal end, a distal open end and a second geometry. The first geometry comprises a first cross-sectional area that is larger than a second cross-sectional area of the second geometry. The first elongated enclosure is inserted into a first input port of the MRD device and the second elongated enclosure is inserted in a second input port of the MRD device diametrically opposite to first input port. When the first elongated enclosure and the second elongated enclosure are inserted into the respective input ports, the second elongated enclosure slides into the first elongated enclosure through the open distal end of the first elongated enclosure.