Medical navigation and mapping system and methods are disclosed for modeling both unobstructed and obstructed portions of a catheter. An exemplary system includes a rendering component operatively associated with an output device. The rendering component overlays a plurality of data images on one another to generate a three-dimensional image representing both the internal tissue and a visible portion of a catheter body. An enhancement component is configured to overlay a silhouette on the three-dimensional image. The silhouette represents an obstructed portion of the catheter body.