A method, system and program product for annotating a transient state of a computer displayed application enables annotation of transient applications particularly web based applications. A transient application address (or key) and state information related to an application at a transient state are stored in an annotation store along with an annotation. The annotation is related to the transient application by the application address or key. The application is automatically restored to the transient state when the annotation is requested. Optionally a screen capture of the application at the transient state is also presented.